You have predicted binding of the peptide GPAGPPGA on the protein surface from PDB 1e88, chain "A" (FIBRONECTIN from Homo sapiens).

The interactive visualization below shows the protein structure and a predicted peptide binding spot. (Don't see anything?) To learn the basic controls, click here.

To display a different prediction, click on the correponding row from the table below, which shows the top matches ranked according to statistical significance (p-value).

rank	p-value	N
1	0.07483	4	gly-1	pro-2	ala-3	gly-4	-----	-----	-----	-----
2	0.2293	3	-----	-----	-----	gly-4	pro-5	pro-6	-----	-----
3	0.2293	3	-----	-----	-----	-----	pro-5	pro-6	gly-7	-----
4	0.2617	3	-----	pro-2	ala-3	gly-4	-----	-----	-----	-----
5	0.2635	3	-----	pro-2	ala-3	-----	-----	-----	-----	ala-8
6	0.287	3	gly-1	pro-2	ala-3	-----	-----	-----	-----	-----
7	0.2886	3	gly-1	pro-2	-----	-----	-----	-----	-----	ala-8
8	0.292	3	gly-1	-----	-----	-----	pro-5	pro-6	-----	-----
9	0.2952	3	-----	pro-2	ala-3	-----	-----	-----	-----	ala-8
10	0.3101	3	gly-1	pro-2	-----	-----	-----	-----	-----	ala-8

Each row from the table above is colored according to statistical significance (p-value) following the color scale below (red = highly significant; yellow = moderately significant; white = not significant).

You can download a PDB file with the top matches or with the interacting receptor residues. For a description of the format used, click here.